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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs149980375 chr16:69849031 G/A 7.76E-5 485 16.27 10.6 18.18 KM Plot
THCA rs150030688 chr1:224402709 G/T 0.000175 489 17 14.12 10.27 KM Plot
THCA rs150040204 chr19:43565580 G/A 0.000237 488 15.32 18.93 10.08 KM Plot
THCA rs150042854 chr16:2956969 T/C 0.000178 482 15.47 16.83 15.4 KM Plot
THCA rs150133067 chr6:87167428 A/ATATG 1.85E-14 479 15 16.63 25.67 KM Plot
THCA rs150136101 chr2:48103327 TCTTTTTGTGCTA/T 4.9E-8 490 15.2 18.9 8.27 KM Plot
THCA rs150156827 chr1:156964628 AGGTAATACTACCTTTCTCAAAG/A 2.63E-6 488 16.63 15.48 12.67 KM Plot
THCA rs150166574 chr19:43562010 T/C 0.000246 486 15.48 18.03 10.08 KM Plot
THCA rs150223044 chr5:1595388 TTTAAA/T 1.02E-7 478 15.32 16.8 15.97 KM Plot
THCA rs150294246 chr7:16429081 C/CA 3.15E-9 485 15.13 17.73 17.77 KM Plot
THCA rs150303838 chr10:81635391 T/G 5.73E-12 475 15.97 15.9 6.03 KM Plot
THCA rs150357349 chr16:2940254 T/G 0.000138 485 15.2 17 15.4 KM Plot
THCA rs150389646 chr9:95841231 G/A 2.02E-6 488 15.7 18.43 16.57 KM Plot
THCA rs150410687 chr16:2960105 T/C 0.000172 485 15.63 16.83 15.4 KM Plot
THCA rs150570527 chr4:1072787 TAGGACCAACAC/T 1.73E-7 476 15.93 15 11.9 KM Plot